Merle Breeding Policy

What is a merle dog?

Merle refers to a color pattern found in a dog’s coat, caused by the merle gene. This unique pattern is typically made up of mottled, patchwork markings it causes in either a solid or piebald coat, showing up on coats that have black or brown as a base color. Merle coats come in a range of colors, including liver merle, red merle, and blue merle, with variations in patterns and patching. Some coats have equal patching, while others might have heavy patching with minimal merle visible in their coat. Merle dogs often have blue or odd-colored eyes and differing skin pigments.

However, the merle gene does not always result in the merle color pattern on a dog’s coat. Cryptic (also known as hidden or phantom) merles are dogs with the merle gene, but who have little or no merle coloring.

The merle gene is associated with an increased risk for some serious health conditions, including, among others, deafness and blindness.

What are the health risks of merles?

Because the merle gene is associated with an increased risk for some serious health conditions. These include anophthalmia (missing one or both eyes), microphthalmia (one or both eyes being abnormally small and malformed), deafness and blindness, and skin cancer. These health risks are more prevalent and severe in double merles (meaning dogs that have two copies of the merle gene) than heterozygous dogs (meaning dogs that have one copy of the gene).

As noted above, the merle gene does not always produce the merle color in the dog’s coat. This means there’s no way to know whether you’re breeding two merles together just by looking at the color of the dogs. The only way to be certain you are not breeding two merles together is to do a specific type of DNA test making the successful breeding of healthy merles complicated.

Additionally, it is recommended that merles should not be bred into lines that carry piebald (white dogs with spots) or extreme white spotting patterns (dogs that are mostly white with minimal spotting). This is due to the fact that the incidence of hearing or vision problems in dogs increases when white markings cover the eyes and/or ears. Research is currently ongoing regarding the prevalence and severity of these problems in merles bred with dogs that carry piebald patterns.

It is generally not recommended to breed two coat patterns that are associated with genetic health problems, such as piebald and merle. Piebald coat pattern is caused by the presence of an incomplete dominant gene called "S" and is associated with several genetic health issues, including deafness, vision problems, and skin cancer. Merle coat pattern is caused by the presence of a dominant gene called "M" and is also associated with several genetic health issues, including deafness, vision problems, and cardiovascular defects.

Breeding two coat patterns that are associated with genetic health problems can increase the risk of producing offspring with these health issues. It is important to consider the health and welfare of the animals when breeding any kind of animal, including dogs. It is generally recommended to breed dogs with healthy genetics to reduce the risk of health problems in the offspring.

Whether the presence of the merle gene results in the merle coloring and what the pattern looks like is influenced by the length of the “poly-A tail” that the merle gene has. It is recommended that, in addition to DNA testing, breeders also test for tail length. Currently, this test is only available at a small number of laboratories.

This color pattern recently emerged in several breeds where it previously hadn't occurred. The odds of this mutation spontaneously appearing in multiple breeds in the last few years is unlikely. More likely is that the gene was introduced into new breeds. The introduction of the merle gene into a new breed has the potential of introducing health problems into a breed where they did not previously exist, the implications of which are often not adequately known or communicated to the public.

The Merle gene is responsible for a wide variety of beautiful coat and iris colors in the dog. This dilution gene acts to lighten the coat color. The dappling effect it creates is not evenly spread; rather, it is responsible for spotting of the coat and variations of the iris or colored part of the eye. A combination of colors may be found in one or both eyes. Colors expressed may range from a pale, light blue to greenish to amber. Unfortunately, the same gene that is responsible for the desirable coat and eye appearance is often responsible for many developmental eye defects. Several of our Breeds at Stokeshire include this gene including our Australian Shepherd & Mini-American Shepherd Lines. We also have AKC Registered Poodles who carry the merle gene.

With respect to ocular effects, the Merle gene’s most minor manifestation is a blue iris (or irides). The blue appearance may also be as an ‘inclusion’ or as a partial segment of another wise brown eye (heterochromia iridis). A blue iris does not absolutely indicate the presence of the Merle gene; it may also be expressed in dogs carrying the piebald gene (represented by sp in poodles also called parti). There is no adverse consequence of the presence of the blue iris alone. Conversely, the other effects of the Merle gene may result in devastating blindness. The abnormalities affect either the front or back part of the eye or a combination of both. When the whole eye is affected, the condition has been referred to as Merle Ocular Dysgenesis.

Since it is understood that multiple congenital ocular abnormalities in the dog may be inherited, a brief review of basic genetics is in order. In any dog, two copies of a gene are present, one from each parent. For the purpose of this discussion, the Merle gene will be termed “m” and the non-merle gene will be called “M”. If both copies are the same for Merle, they are termed homozygous (mm) or a double merle. A double Merle will be a predominantly white dog. If one copy is Merle and one is not, they are called heterozygous (Mm). One Merle gene copy is dominant over the non-Merle gene in that just one copy (Mm) will produce dilution of the coat and potentially different colored eyes, which is considered desirable in many breeds. A dog that is homozygous for non-merle (MM) is a normal, full-colored dog. In the Australian Shepherd dog, multiple ocular abnormalities due to the Merle gene occur secondarily to an autosomal recessive trait. Autosomal implies that this is not a sex-linked condition. Since a recessive trait is expressed only when homozygous, this means that affected dogs must be a double Merle (mm). Double merle animals may also have varying degrees of congenital deafness. The most severe abnormalities occur in homozygous merles with an excessive white hair coat involving the head region.

There are other, more serious ocular problems associated with the Merle gene. Microphthalmia is a congenital defect characterized by a small eye. Severely affected dogs may be blind at birth. Iris changes include thinning of the iris (iris hypoplasia) and possibly an eccentric or off-centered pupil, known as Corectopia. An iris coloboma is an abnormality in the development of the iris that usually presents as a notch or cleft of the iris at the edge of the pupil. Another problem that occurs with the iris may be persistent pupillary membranes or PPMs. Pupillary membranes are present in the developing eye in utero but normally regress within the first few weeks of life. When persistent, they represent a congenital defect from blood vessel remnants that fail to regress.

They may appear as strands or sheets of tissue that originate from the iris and attach to another part of the iris, the lens, or the cornea. They range from being of minor significance to causing severe vision impairment. A cataract, or an opacity, of the crystalline lens or its capsule, is yet another possible heritable defect associated with the Merle gene. It may be found independently or in a microphthalmic eye. Cataracts, if focal, may only cause minor impairment of vision, but when cataracts are complete, blindness occurs.

The posterior segment (the back part of the eye) may also be affected. Colobomas, or notch defects, may affect the sclera or the white of the eye. A scleral coloboma indicates the presence of an abnormally thin region of sclera; this condition is known as scleral ectasia. When this occurs the vascular layer bulges out beneath the fibrous coat of the eye. This is known as a staphyloma. These may occur in the front half of the eye, apparent as a bulge underneath the eyelid or they may be in the back of the eye, only visualized using special instrumentation. Choroidal hypoplasia or choriodal colobomas may also be seen. In this condition, the vascular layer at the back of the eye develops incompletely. Posterior segment anomalies may also affect the optic nerve. The optic nerve’s job is transmission of information from the retina to the brain for the interpretation of vision. When a defect at this level of the eye is minor, a patient remains visual; alternatively, a more serious defect of the optic nerve may be the cause of complete blindness.

In addition to the optic nerve, the retina may also be affected negatively. Retinal dysplasia is abnormal development of the sensory retina with focal folds or widespread geographic maldevelopment. This may occur in conjunction with retinal detachment. If the retina becomes completely detached, blindness ensues. In some dogs with a Merle coat, the tapetum or reflective layer at the back of the eye is missing. These dogs may have somewhat poorer night vision compared to an eye with a tapetum, but there is no obvious functional abnormality with these dogs.

With an array of problems that may have a common end result of blindness, informed breeders will not breed affected animals because those with ‘mild disease’ may still produce severely affected offspring. It is also understood not to breed merle to merle as this will increase the chances for double merles in the litter. As such, it is advisable to include more ‘solids’ or darkly-colored animals in a breeding program. It is always ideal to have breeding animals evaluated by a veterinary ophthalmologist to rule out structural abnormalities of the eyes. This can be accomplished via an OFA Eye certification exam, formerly known as a CERF exam. The OFA is an organization that tracks heritable diseases in many parts of the body including eyes in dogs with the goal of identifying and eliminating genetic conditions. The certification exam can only be performed by a board-certified veterinary ophthalmologist. A certification exam is valid for one year. Ideally, dogs should be certified every year by a veterinary ophthalmologist to ensure that conditions that may be progressive or develop later in life have not appeared. These exams do not guarantee that the dog is not a carrier of genetic ocular disease; rather, a passing test proves that at that time of the exam no genetic ocular disease was diagnosed. If a dog’s status is unknown, it is strongly recommended not to breed. With respect to the Merle gene and ocular dysgenesis, these abnormalities are congenital, which means they are present at birth. They do not show up later in life; therefore, they may be diagnosed in a puppy as young as six weeks old.

Source: 1,2,